Thomas Jefferson University provides support for open access publishing through direct reimbursement to authors for the article processing charge (APC) for fully open access journals, and through transformative/read-write agreements with publishers which waive APCs for Jefferson authors. The program of providing funding for reimbursement of APCs began in October 2018. The first transformative/read-write agreements went into effect in January 2023.
As part of Jefferson's commitment to the Compact for Open-Access Publishing Equity (COPE), these programs raise awareness of the high-quality Open Access publishing options and increase the reach and impact of Jefferson scholarship.
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Manuscripts from 2021
Reactive granulomatous dermatitis associated with ovarian cancer and a review of its role as a harbinger for malignancy, Alexander Sherban, Jisun Cha, and Elizabeth Jones
Reduction in Hospital System Opioid Prescribing for Acute Pain Through Default Prescription Preference Settings: Pre-Post Study, Benjamin Heritier Slovis, Jeffrey Riggio, Melanie Girondo, Cara Martino, Bracken Babula, Lindsey Roke, and John C. Kairys
Impact of lymphopenia on survival for elderly patients with glioblastoma: A secondary analysis of the CCTG CE.6 (EORTC 26062-22061, TROG03.01) randomized clinical trial, Andrew Song, Keyue Ding, Iyad Alnahhas, Normand J Laperriere, James Perry, Warren P Mason, Chad Winch, Chris J O'Callaghan, Johan J Menten, Alba A Brandes, Claire Phillips, Michael F Fay, Ryo Nishikawa, David Osoba, J Gregory Cairncross, Wilson Roa, Wolfgang Wick, and Wenyin Shi
Strongyloides stercoralis and HTLV-1 coinfection in CD34+ cord blood stem cell humanized mice: Alteration of cytokine responses and enhancement of larval growth., Lauren E. Springer, John B. Patton, Tingting Zhan, Arnold B. Rabson, Hsin-Ching Lin, Tim Manser, James B. Lok, Jessica A. Hess, and David Abraham
Gray Matter Sampling Differences Between Subdural Electrodes and Stereoelectroencephalography Electrodes., Mohamed Tantawi, Jingya Miao, Caio Matias, Christopher T. Skidmore, Michael R. Sperling, Ashwini Sharan, and Chengyuan Wu
Undergraduate Research in the Time of COVID-19: A Remote Imaging Protocol for Physically Distanced Students Studying Wildlife., Manuela Tripepi and Tobias Landberg
Impact of Body Mass Index on COVID-19-Related In-Hospital Outcomes and Mortality., Waqas Ullah, Sohaib Roomi, Nayab Nadeem, Rehan Saeed, Shafaq Tariq, Moataz Ellithi, Shujaul Haq, Ahmad Arslan, John Madara, Margot Boigon, Donald C. Haas, and David L. Fischman
Risk Factors for Poor Outcomes Among Patients with Extensively Drug-Resistant Tuberculosis (XDR-TB): A Scoping Review., Karan Varshney, Beverly Anaele, Matthew Molaei, Rosemary Frasso, and Vittorio Maio
Provider experiences of virtual reality in clinical treatment, Christine Vincent, Margaret Eberts, Tejal U. Naik, Victoria Gulick, and C. Virginia O'Hayer
Improved Prognostic Stratification Using Circulating Tumor Cell Clusters in Patients with Metastatic Castration-Resistant Prostate Cancer., Chun Wang, Zhenchao Zhang, Weelic Chong, Rui Luo, Ronald E Myers, Jian Gu, Jianqing Lin, Qiang Wei, Bingshan Li, Timothy R Rebbeck, Grace Lu-Yao, William K Kelly, and Hushan Yang
Dynamic Network Connectivity Reveals Markers of Response to Deep Brain Stimulation in Parkinson’s Disease, Chengyuan Wu, Caio Matias, Thomas Foltynie, Patricia Limousin, Ludvic Zrinzo, and Harith Akram
Severe Congenital Factor VII Deficiency with Normal Perioperative Coagulation Profile Based on ROTEM Analysis in a Hepatectomy., Richard S. Yeom, Xuejun A. Wang, Elia Elia, and Uzung Yoon
Rapidly progressive ACTH-dependent Cushing’s disease masquerading as ectopic ACTH-producing Cushing’s syndrome: illustrative case, Siyuan Yu, Michael Karsy, Jeffery Miller, Stephanie R. Beldick, Mark T. Curtis, Marc Rosen, and James J. Evans
Manuscripts from 2020
Health Design Thinking: An Innovative Approach in Public Health to Defining Problems and Finding Solutions, Sylvie Abookire; Colin Plover, PhD; Rosemary Frasso PhD, MSc, CPH; and Bon Ku
Adrenal ectopy and lipoma of an inguinal hernia sac: A case report & literature review., Jenna R Adalbert and Rafael E Pajaro
STXBP2-R190C Variant in a Patient With Neonatal Hemophagocytic Lymphohistiocytosis (HLH) and G6PD Deficiency Reveals a Critical Role of STXBP2 Domain 2 on Granule Exocytosis, Nathalia Benavides, Waldo A Spessott, Maria L Sanmillan, Marcelo Vargas, Mylynda S Livingston, Nissa Erickson, Tamara C Pozos, Margaret E McCormick, Emilia Scharrig, Yoav H Messinger, and Claudio G. Giraudo
GRK6 regulates the hemostatic response to injury through its rate-limiting effects on GPCR signaling in platelets., Xi Chen, Shuchi Gupta, Matthew Cooper, Daniel DeHelian, Xuefei Zhao, Meghna U. Naik, Jeremy G.T. Wurtzel, Timothy J. Stalker, Lawrence E. Goldfinger, Jeffrey Benovic, Lawrence F. Brass, Steven E. McKenzie, Ulhas P. Naik, and Peisong Ma
The Roles of GRKs in Hemostasis and Thrombosis, Xi Chen, Xuefei Zhao, Matthew Cooper, and Peisong Ma
Modulation of sleep-courtship balance by nutritional status in Drosophila, José M Duhart, Victoria Baccini, Yanan Zhang, Daniel R Machado, and Kyunghee Koh
Lyssavirus Vaccine with a Chimeric Glycoprotein Protects across Phylogroups, Christine R Fisher, David E Lowe, Todd G Smith, Yong Yang, Christina L Hutson, Christoph Wirblich, Gino Cingolani, and Matthias J. Schnell
Pregnancy management in a patient with stickler syndrome., Julie Gomez, Stephanie M. Rice, Mona M. Makhamreh, and Huda B. Al-Kouatly
Accuracy of Vital Signs Measurements by a Smartwatch and a Portable Health Device: Validation Study., Christina Hahnen, Cecilia G. Freeman, Nilanjan Haldar, Jacquelyn N. Hamati, Dylan M. Bard, Vignesh Murali, Geno J. Merli, Jeffrey I. Joseph, and Noud van Helmond
Extended Prophylactic Antibiotics for Mastectomy with Immediate Breast Reconstruction: A Meta-analysis, Yang Hai, Weelic Chong, and Melissa Lazar
Design and Printing of a Low-Cost 3D-Printed Nasal Osteotomy Training Model: Development and Feasibility Study., Michelle Ho, Jared Goldfarb, Roxana Moayer, Uche Nwagu, Rohan Ganti, Howard Krein, Ryan Heffelfinger, and Morgan Leigh Hutchinson
Where there's smoke, there's fire: what current and future providers do and do not know about electronic cigarettes., Josephine Hwang, MDc, MPHc; Crystal Lee; Eric Mastrolonardo; and Rosemary Frasso PhD, MSc, CPH
Sudden shoulder swelling in an elderly man after the flu shot., Joseph Jean, MD; Elizabeth M Lee; and Xiao Chi Zhang
Solving Community SARS-CoV-2 Testing With Telehealth: Development and Implementation for Screening, Evaluation and Testing., Aditi Joshi, Resa E. Lewiss, Maria Aini, Bracken Babula, and Patricia C. Henwood
A dog lover's dilemma: Airborne allergic contact dermatitis to tylosin., Aditi Kale and Anthony A Gaspari
Cancer-Associated Fibroblast Density, Prognostic Characteristics, and Recurrence in Head and Neck Squamous Cell Carcinoma: A Meta-Analysis., Alexander M Knops, Andrew South, Ulrich Rodeck, Ubaldo Martinez-Outschoorn, Larry A Harshyne, Jennifer Johnson, Adam J Luginbuhl, and Joseph M Curry
iSeqQC: a tool for expression-based quality control in RNA sequencing., Gaurav Kumar, Adam Ertel, George Feldman, Joan Kupper, and Paolo Fortina
Contrasting cumulative risk and multiple individual risk models of the relationship between Adverse Childhood Experiences (ACEs) and adult health outcomes, Marianna LaNoue, Brandon George, Deborah L Helitzer, and Scott W Keith
Empiric Treatment for Suspected Malaria in the United States: A Case Report., Jonathan C. Li and Emma Lundsmith
The Use of High-Flow Nasal Oxygen in the ICU as a First-Line Therapy for Acute Hypoxemic Respiratory Failure Secondary to Coronavirus Disease 2019., Gregory McDonough, Phue Khaing, Taylor Treacy, Christopher McGrath, and Erika J Yoo
Heat Shock Protein 90 (Hsp90)-Inhibitor-Luminespib-Loaded-Protein-Based Nanoformulation for Cancer Therapy, Ankit K. Rochani; Sivakumar Balasubramanian; Aswathy Ravindran Girija; Toru Maekawa; Gagan Kaushal, PhD; and D Sakthi Kumar
Efficacy of Hydroxychloroquine and Tocilizumab in Patients With COVID-19: Single-Center Retrospective Chart Review., Sohaib Roomi, Waqas Ullah, Faizan Ahmed, Soban Farooq, Usama Sadiq, Asad Chohan, Munnam Jafar, Maryum Saddique, Shristi Khanal, Robert Watson, and Margot Boigon
Mitochondrial Quality Control in Age-Related Pulmonary Fibrosis., Willy Roque, Karina Cuevas-Mora, and Freddy Romero
Contribution of left supramarginal and angular gyri to episodic memory encoding: An intracranial EEG study., Daniel Y. Rubinstein, Liliana Camarillo-Rodriguez, Mijail D. Serruya, Nora A. Herweg, Zachary J. Waldman, Paul A. Wanda, Ashwini D. Sharan, Shennan A. Weiss, and Michael R. Sperling
Denosumab-Induced Hypocalcemia after Billroth II Gastric Bypass Surgery., Abigail M Schmucker, Dina E Green, and Philip M Montemuro
Flavonoids and Other Polyphenols Act as Epigenetic Modifiers in Breast Cancer., Priyanga Selvakumar, Aja Badgeley, Paige Murphy, Hina Anwar, Urvashi Sharma, Katharine Lawrence, and Ashakumary Lakshmikuttyamma
The De Garengeot hernia: A case report of an unusual presentation of appendicitis., Davek Sharma, Jacob Katsnelson, Emmanuel Nwachuku, and Jeffrey Kolff
The Pulmonary Venous Ridge Length to Stratify Stroke Risk in Atrial Fibrillation, Varun Singh; Joy Li; Mark Keroles; Daniel Frisch; Behzad B. Pavri; Baskaran Sundaram, MD; Jason Jacobson; and Rajiv Kabadi
Discrepancies in Written Versus Calculated Durations in Opioid Prescriptions: Pre-Post Study., Benjamin H. Slovis, John Kairys, Bracken Babula, Melanie Girondo, Cara Martino, Lindsey M. Roke, and Jeffrey Riggio
A Rare Case of Bleeding Epiphrenic Esophageal Diverticulum From Arteriovenous Malformations., Franklin L. Thelmo, Harvey Guttmann, Waqas Ullah, Ahmad Arslan, and Eugen Brailoiu
The Role of Nerves in Skeletal Development, Adaptation, and Aging., Ryan E Tomlinson, Blaine A Christiansen, Adrienne A Giannone, and Damian C Genetos
Utilizing Digital Health to Collect Electronic Patient-Reported Outcomes in Prostate Cancer: Single-Arm Pilot Trial, Christine Tran, MS; Adam Dicker, MD, PhD; Benjamin Leiby, PhD; Eric Gressen, MD; Noelle Williams, MD; and Heather Jim, PhD
Osteoblastoma in the occipital bone: A case report of a rare tumor in the calvarium, Lukas M. Trunz, Scott H. Faro, and Richard J. Gorniak
A rare association of Takotsubo cardiomyopathy with neuroleptic malignant syndrome, Waqas Ullah, Muhammad Arslan Cheema, Ammar Ashfaq, Maryam Mukhtar, Zain Ali, Mamoon Ur Rashid, and Vincent Figueredo
Efficacy of Allopurinol in Cardiovascular Diseases: A Systematic Review and Meta-Analysis, Waqas Ullah, Shristi Khanal, Rozi Khan, Bikash Basyal, Samavia Munir, Artem Minalyan, M. Chadi Alraies, and David L. Fischman
Diagnostic Accuracy of Cardiac Magnetic Resonance Versus Fractional Flow Reserve: A Systematic Review and Meta-Analysis., Waqas Ullah, Sohaib Roomi, Hafez M. Abdullah, Maryam Mukhtar, Zain Ali, Ping Ye, Donald C. Haas, and Vincent M. Figueredo
Initial Experience Using 3-Dimensional Printed Models for Head and Neck Reconstruction in Haiti., Swar Vimawala, Terry Gao, Jared Goldfarb, Dominick Gadaleta, Bon Ku, Patrick Jean-Gilles, Adam Luginbuhl, Robert Pugliese, Donald Weed, and Joseph M Curry
Sevoflurane Pre-conditioning Ameliorates Diabetic Myocardial Ischemia/Reperfusion Injury Via Differential Regulation of p38 and ERK., Dina Xie, Jianli Zhao, Rui Guo, Liyuan Jiao, Yanqing Zhang, Wayne Bond Lau, Bernard Lopez, Theodore Christopher, Erhe Gao, Jimin Cao, Xin-Liang Ma, and Yajing Wang
Manuscripts from 2019
Effect on nurse and patient experience: overnight use of blue-depleted illumination, Lorenzo Albala, Timothy Bober, Graham Hale, Benjamin Warfield, Micaela Langille Collins, Zachary Merritt, Eric Steimetz, Shmuel Nadler, Yair Lev, and John Hanifin
Cuff-Less Methods for Blood Pressure Telemonitoring., Dylan M. Bard, Jeffrey I. Joseph, and Noud van Helmond
New Insights into the Lactate Shuttle: Role of MCT4 in the Modulation of the Exercise Capacity., Sara Bisetto, Megan C Wright, Romana A Nowak, Angelo C Lepore, Tejvir S Khurana, Emanuele Loro, and Nancy J Philp
Role of echocardiography in diagnostic evaluation of patients admitted to observation unit., Muhammad Arslan Cheema, Hafez Mohammad Ammar Abdullah, Waqas Ullah, Yasar Sattar, Shujaul Haq, Khadija Cheema, Asrar Ahmad, Zain Ali, and Asoka Balaratna
Ultrasound-triggered antibiotic release from PEEK clips to prevent spinal fusion infection: Initial evaluations., Lauren J. Delaney, Daniel MacDonald, Jay Leung, Keith Fitzgerald, Alex M. Sevit, John R. Eisenbrey, Neil Patel, Flemming Forsberg, Christopher K. Kepler, Taolin Fang, Steven M. Kurtz, and Noreen J. Hickok
Tumor-Derived Extracellular Vesicles Require β1 Integrins to Promote Anchorage-Independent Growth., Rachel M. DeRita, Aejaz Sayeed, Vaughn Garcia, Shiv Ram Krishn, Christopher D. Shields, Srawasti Sarker, Andrea Friedman, Peter McCue, Sudheer Kumar Molugu, Ulrich Rodeck, Adam P. Dicker, and Lucia R. Languino
TRADD regulates perinatal development and adulthood survival in mice lacking RIPK1 and RIPK3., John P. Dowling, Mohamed Alsabbagh, Christina Del Casale, Zheng-Gang Liu, and Jianke Zhang
Combined Modality Therapies for High-Risk Prostate Cancer: Narrative Review of Current Understanding and New Directions., Benjamin A. Greenberger, Victor E. Chen, and Robert B. Den
The Voices of Graduates: Informing Faculty Practices to Establish Best Practices for Readying NCLEX-RN Applicants, Mary Hanson-Zalot, Angela Gerolamo, and Julia Ward
A Case Report of Case Report Pursuit by Medical Student, Jonathan Li, Jennifer Wilson, and Wayne Bond Lau
Functionalization of CD36 Cardiovascular Disease and Expression Associated Variants by Interdisciplinary High Throughput Analysis., Namrata Madan, Andrew R. Ghazi, Xianguo Kong, Edward S. Chen, Chad A. Shaw, and Leonard C. Edelstein
Tendinosis develops from age- and oxygen tension-dependent modulation of Rac1 activity., Rowena McBeath, Richard W. Edwards, Brian J. O'Hara, Mitchell G. Maltenfort, Susan M. Parks, Andrzej Steplewski, A. Lee Osterman, and Irving M. Shapiro
Patient experience and challenges in group concept mapping for clinical research., Geoffrey D. Mills, Marianna LaNoue, Alexzandra T. Gentsch, Amanda M.B. Doty, Amy Cunningham, Garrison Nord, and Kristin L. Rising
Gasdermin pores permeabilize mitochondria to augment caspase-3 activation during apoptosis and inflammasome activation., Corey Rogers, Dan A. Erkes, Alexandria Nardone, Andrew E. Aplin, Teresa Fernandes-Alnemri, and Emad S. Alnemri
Codelivery of Genistein and miRNA-29b to A549 Cells Using Aptamer-Hybrid Nanoparticle Bioconjugates., Koita Sacko, Karthik Thangavel, and Sunday A. Shoyele
Validation of a Miniaturized Permeability Assay Compatible with CRISPR-Mediated Genome-Wide Screen., Claire Simonneau, Junning Yang, Xianguo Kong, Robert Kilker, Leonard Edelstein, Paolo Fortina, Eric R. Londin, and Arie Horowitz
Effect of Verbal Directions on Grip Strength Evaluated Using the Handheld Dynamometer, Laura Walsh, OTD, OTR/L, CHT and Marie-Christine Potvin, PhD, OTR/L
Telemedicine Training in Undergraduate Medical Education: Mixed-Methods Review., Shayan Waseh, MPH and Adam P. Dicker, MD, PhD, FASTRO
Feasibility Pilot Outcomes of a Mammography Decision Support and Navigation Intervention for Women With Serious Mental Illness Living in Supportive Housing Settings., Lara Weinstein, Marianna LaNoue, Katelyn Hurley, Colleen Payton, Randa Sifri, and Ronald Myers
Targeted Epidural Blood Patches Under Fluoroscopic Guidance For Incidental Durotomies Related To Spine Surgeries: A Case Series., Andrew K. Wong, Mohammad Rasouli, Andrew Ng, and Dajie Wang
Resistance to ectromelia virus infection requires cGAS in bone marrow-derived cells which can be bypassed with cGAMP therapy., Eric B. Wong, Brian Montoya, Maria Ferez, Colby Stotesbury, and Luis J. Sigal
Langerhans Cells Orchestrate the Protective Antiviral Innate Immune Response in the Lymph Node., Eric B. Wong, Brian Montoya, Colby Stotesbury, Maria Ferez, Ren-Huan Xu, and Luis J. Sigal
Murine MPDZ-linked hydrocephalus is caused by hyperpermeability of the choroid plexus., Junning Yang, Claire Simonneau, Robert Kilker, Laura Oakley, Matthew D. Byrne, Zuzana Nichtova, Ioana Stefanescu, Fnu Pardeep-Kumar, Sushil Tripathi, Eric Londin, Pascale Saugier-Veber, Belinda Willard, Mathew Thakur, Stephen Pickup, Hiroshi Ishikawa, Horst Schroten, Richard Smeyne, and Arie Horowitz
Emergent airway management outside of the operating room - a retrospective review of patient characteristics, complications and ICU stay., Uzung Yoon, Jeffrey Mojica, Matthew Wiltshire, Kara Segna, Michael Block, Anthony Pantoja, Marc Torjman, and Elizabeth Wolo
RIPK1 can mediate apoptosis in addition to necroptosis during embryonic development., Xuhua Zhang, John P. Dowling, and Jianke Zhang
Manuscripts from 2018
Transgenic mice overexpressing human TNF-α experience early onset spontaneous intervertebral disc herniation in the absence of overt degeneration., Deborah J. Gorth, Irving M. Shapiro, and Makarand V. Risbud
RGS10 shapes the hemostatic response to injury through its differential effects on intracellular signaling by platelet agonists., Peisong Ma, Shuchi Gupta, Sara Sampietro, Daniel DeHelian, Valerie Tutwiler, Alan Tang, Timothy J. Stalker, and Lawrence F. Brass
Acidity and Antioxidant Activity of Cold Brew Coffee., Niny Z. Rao and Megan Fuller
